|
Site name/ Rice type
|
No. of grains/a accessions
|
qSH1b
|
sh4b
|
DJ6 F1–R1b
|
DJ6 F1–R1b
|
|---|
|
G
|
T
|
NA
|
T
|
G
|
NA
|
98
|
315
|
NA
|
102
|
NA
|
|---|
|
West trench
|
120
|
0
|
0
|
120
|
0
|
0
|
120
|
1
|
0
|
119
|
0
|
120
|
|
South trench
|
50
|
0
|
0
|
50
|
0
|
0
|
50
|
2
|
0
|
48
|
5
|
45
|
|
Japonica/ Tropical/ Lowland
|
7
|
7
|
0
|
0
|
0
|
7
|
0
|
1
|
6
|
0
|
6
|
1
|
|
Japonica/ Temperate/ Lowland
|
4
|
4
|
0
|
0
|
0
|
4
|
0
|
3
|
1
|
0
|
1
|
3
|
|
Japonica/ Temperate/ Upand
|
3
|
3
|
0
|
0
|
0
|
3
|
0
|
0
|
3
|
0
|
3
|
0
|
|
Indica
|
19
|
19
|
0
|
0
|
0
|
19
|
0
|
0
|
19
|
0
|
19
|
0
|
- aNumerical number indicates number of accessions in modern rice accessions
- bElectrophoresis and sequencing were used to detect an expected DNA fragment in regions qSH1, sh4 and DJ6 and the size of each DNA fragment was used as the genotype name. “F1–R1” or “F1–R2” are primer set in DJ6. NA = Not amplification by specific primer set
