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Table 5 Classification by sequence type in chloroplast genome regions

From: Classification of archaic rice grains excavated at the Mojiaoshan site within the Liangzhu site complex reveals an Indica and Japonica chloroplast complex

Rice type No. ofa grains/ accessions trnIb rps16b intron1 Orf100b
SNP In/del In/del
Modern
Japonica 13 A Insertion
Japonica 1 A Insertion
Indica 17 G Insertion
Indica 1 G
Indica 1 G Insertion
Archaic rice grains at West trench
 I 1 A Insertion
 II 2 A UN Insertion
 III 1 A Insertion UN
 IV 7 A UN UN
 V 1 G UN Insertion
 VI 1 G UN UN
 VII 4 UN UN Insertion
 VIII 3 UN Insertion
  1. aNumerical number indicates number of accessions in modern Japonica and Indica
  2. bUN Sequence was not Not detected because of DNA fragmentation, −: Not insertion type